GSE232222
Human 2024
Mosaic loss of Y chromosome in aging and chronic kidney disease
snRNA-seq, snATAC-seq and single-cell multiome of human kidney
Wilson et al., Genome Biology 2024
All sequencing data from our published studies are deposited in NCBI GEO. Each dataset links to its paper and, where available, a containerized analysis workflow.
Wilson lab datasets
GSE232431
Human 2024
Spatial transcriptomics of human kidney (Visium FFPE)
10x Visium spatial gene expression
Wilson et al., Genome Biology 2024
GSE195460
Human 2022
Multimodal single-cell sequencing of human diabetic kidney disease
snRNA-seq and snATAC-seq of control and diabetic kidney
Wilson & Muto et al., Nature Communications 2022
GSE151302
Human 2021
Single-cell transcriptional and chromatin accessibility profiling of the adult human kidney
snRNA-seq and snATAC-seq of healthy adult kidney
Muto & Wilson et al., Nature Communications 2021
GSE131882
Human 2019
The single-cell transcriptomic landscape of early human diabetic nephropathy
snRNA-seq of control and early diabetic kidney
Wilson et al., PNAS 2019
Collaborative datasets
GSE220289
Human 2024
Proximal tubule failed repair drivers from single-cell multiomics
snRNA-seq, snATAC-seq and multiome of adult human kidney (SuperSeries)
Ledru et al., Nature Communications 2024
GSE271708
Human 2024
Circulating proteins and fast progression to ESKD in diabetes
RNA-seq (expression profiling)
Ihara et al., JCI Insight 2024
GSE294923
Mouse 2025
Nfkb1 removal from proximal tubule after ischemia-reperfusion injury
Expression and chromatin profiling of mouse kidney
Cheng et al., Kidney360 2025
Software & workflows
Containerized pipelines and methods for single-cell, allele-specific and copy-number analysis are on our Software page and on GitHub.
Related community resources
- Kidney Precision Medicine Project (KPMP) Atlas
- Humphreys Lab Kidney Interactive Transcriptomics
- Human Pancreas Analysis Program (HPAP)
Questions about data access or reuse? Email us.